STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733415_06169Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_000733415_06168
Unannotated protein.
 
     0.882
GCA_000733415_06167
Unannotated protein.
       0.767
GCA_000733415_04675
Unannotated protein.
  
     0.534
GCA_000733415_05988
Unannotated protein.
  
     0.530
GCA_000733415_00957
Unannotated protein.
  
     0.521
GCA_000733415_06166
Unannotated protein.
       0.488
GCA_000733415_01362
Unannotated protein.
  
     0.479
GCA_000733415_05490
Unannotated protein.
  
     0.479
GCA_000733415_05458
Unannotated protein.
  
     0.457
GCA_000733415_03448
Unannotated protein.
  
     0.454
Your Current Organism:
Leptolyngbya sp. JSC1
NCBI taxonomy Id: 1487953
Other names: Leptolyngbya sp. JSC-1, Marsacia ferruginose ATCC BAA-2121, Oscillatoriales cyanobacterium JSC-1, [. sp. JSC-1, [Leptolyngbya] sp. JSC-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.