STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR71_1293Sigma-70, region 4 family protein. (328 aa)    
Predicted Functional Partners:
DR71_1294
rmlD substrate binding domain protein.
       0.547
DR71_1295
eamA-like transporter family protein.
       0.547
DR71_1291
Putative transposase for insertion sequence.
       0.422
DR71_1296
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
  
    0.415
Your Current Organism:
Corynebacterium sp. ATCC 6931
NCBI taxonomy Id: 1487956
Other names: C. sp. ATCC 6931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.