ALJ30743.1 protein (Lactobacillus kunkeei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ALJ30743.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)

Predicted Functional Partners:

ALJ30742.1

0.615

ALJ30741.1

0.599

ALJ31806.1

0.566

ALJ31711.1

0.557

ALJ30722.1

0.540

ALJ32077.1

0.540

ALJ30963.1

0.535

ALJ30740.1

0.534

ALJ31205.1

0.515

ALJ30744.1

0.513

Your Current Organism:

Lactobacillus kunkeei

NCBI taxonomy Id: 148814
Other names: ATCC 700308, DSM 12361, JCM 16173, L. kunkeei, strain YH-15

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALJ30722.1	ALJ30743.1	APS55_00040	APS55_00155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
ALJ30722.1	ALJ31205.1	APS55_00040	APS55_02715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
ALJ30722.1	ALJ31806.1	APS55_00040	APS55_06125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
ALJ30740.1	ALJ30741.1	APS55_00140	APS55_00145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ALJ30740.1	ALJ30742.1	APS55_00140	APS55_00150	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
ALJ30740.1	ALJ30743.1	APS55_00140	APS55_00155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
ALJ30741.1	ALJ30740.1	APS55_00145	APS55_00140	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
ALJ30741.1	ALJ30742.1	APS55_00145	APS55_00150	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
ALJ30741.1	ALJ30743.1	APS55_00145	APS55_00155	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
ALJ30742.1	ALJ30740.1	APS55_00150	APS55_00140	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
ALJ30742.1	ALJ30741.1	APS55_00150	APS55_00145	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
ALJ30742.1	ALJ30743.1	APS55_00150	APS55_00155	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
ALJ30743.1	ALJ30722.1	APS55_00155	APS55_00040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
ALJ30743.1	ALJ30740.1	APS55_00155	APS55_00140	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
ALJ30743.1	ALJ30741.1	APS55_00155	APS55_00145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
ALJ30743.1	ALJ30742.1	APS55_00155	APS55_00150	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
ALJ30743.1	ALJ30744.1	APS55_00155	APS55_00160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.513
ALJ30743.1	ALJ30963.1	APS55_00155	APS55_01380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	IpaB/EvcA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
ALJ30743.1	ALJ31205.1	APS55_00155	APS55_02715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
ALJ30743.1	ALJ31711.1	APS55_00155	APS55_05630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557