STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ31394.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)    
Predicted Functional Partners:
ALJ31393.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
ALJ31392.1
Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
ALJ31395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
ALJ31082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
ALJ31012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
ALJ31391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
ALJ31013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.510
ALJ31014.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.490
ALJ31016.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.438
ALJ31290.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.410
Your Current Organism:
Lactobacillus kunkeei
NCBI taxonomy Id: 148814
Other names: ATCC 700308, DSM 12361, JCM 16173, L. kunkeei, strain YH-15
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.