STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ31851.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)    
Predicted Functional Partners:
ALJ31686.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.931
ALJ30721.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
 
 0.890
ALJ32076.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.890
ALJ32141.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
 0.876
ALJ32054.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.870
divIB
Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.829
ALJ31917.1
Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.816
gpsB
Hypothetical protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
  
 0.765
ALJ31850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.750
ALJ31980.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.680
Your Current Organism:
Lactobacillus kunkeei
NCBI taxonomy Id: 148814
Other names: ATCC 700308, DSM 12361, JCM 16173, L. kunkeei, strain YH-15
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