STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q9KUY9Serine--tRNA ligase. (76 aa)    
Predicted Functional Partners:
A0A4Q9LN39
Tyrosine--tRNA ligase.
  
  
 0.902
A0A4Q9KS42
Valine--tRNA ligase.
  
 
 0.882
A0A4Q9KTP1
Valine--tRNA ligase.
  
 
 0.882
A0A4Q9LEA5
Alpha subunit of phenylalanine--tRNA ligase.
  
 
 0.857
A0A4Q9LES5
Alpha subunit of phenylalanine--tRNA ligase.
  
 
 0.857
A0A4Q9LFK0
Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.857
A0A4Q9LCL0
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.832
A0A4Q9LJJ1
Subunit Spt3 of PCAF/SAGA histone acetyltransferase complex.
    
 
 0.793
A0A4Q9L7H6
GCN5-like bromodomain-containing histone acetyltransferase.
    
 
 0.770
A0A4Q9L0C5
Subunit 9 of transcription initiation factor IID.
    
 
 0.769
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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