STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q9KZZ5Putative helicase. (943 aa)    
Predicted Functional Partners:
A0A4Q9LK24
ARID domain-containing protein.
    
 0.999
A0A4Q9KZ38
Chromodomain-helicase-DNA-binding protein.
 
     0.952
A0A4Q9LB04
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.919
A0A4Q9L0F9
DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
  
 0.897
A0A4Q9LG47
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
    
 
 0.885
A0A4Q9L2V9
Uncharacterized protein.
   
 0.871
A0A4Q9LL64
Subunit RPB3 of DNA-directed RNA polymerase II.
   
 0.866
A0A4Q9L4B5
Scd6-like Sm domain-containing protein.
   
 
 0.863
A0A4Q9L3L7
DUF5097 domain-containing protein.
   
 0.854
A0A4Q9LIP9
Subunit Spt16 of FACT complex.
    
 
 0.854
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.