STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q9L684RNA-dependent RNA polymerase. (2313 aa)    
Predicted Functional Partners:
A0A4Q9L0A1
ATP-dependent helicase.
     
 0.870
A0A4Q9LDY1
Putative poly(A) polymerase.
    
 
 0.691
A0A4Q9LDP2
Putative Dicer endoribonuclease.
    
 
 0.684
A0A4Q9LFM8
Putative Dicer endoribonuclease.
    
 
 0.684
A0A4Q9LEP6
RNA helicase.
      
 0.633
A0A4Q9KW12
Subunit Rpb9 of DNA-directed RNA polymerase II.
    
   0.557
A0A4Q9LL64
Subunit RPB3 of DNA-directed RNA polymerase II.
    
   0.557
A0A4Q9LF29
Chromo domain-containing protein.
    
 
 0.550
A0A4Q9LIR6
Exportin 1.
      
 0.474
A0A4Q9KTQ6
PAP_RNA-bind domain-containing protein.
      
 0.465
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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