STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q9L8B5rRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (487 aa)    
Predicted Functional Partners:
A0A4Q9L7Z1
Putative Noc2p-like protein.
   
 
 0.950
A0A4Q9L4U3
Nucleolar GTP-binding protein 1.
   
 
 0.927
A0A4V2JTQ6
Brix domain-containing protein.
   
 
 0.924
A0A4Q9LHA5
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
  
 
 0.910
A0A4Q9LHE6
Uncharacterized protein.
   
   0.908
A0A4Q9L3S8
BRCT domain-containing protein.
   
 
 0.892
A0A4Q9LK61
tRNA/rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
0.892
A0A4Q9LDZ0
Fibrillarin-like nucleolar protein.
   
 
 0.886
A0A4Q9LEB5
Putative nucleolar complex protein.
   
 
 0.886
A0A4Q9LLD4
Uncharacterized protein.
   
 
 0.881
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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