A0A4Q9LH07 protein (Hamiltosporidium magnivora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Q9LH07

CNH domain-containing protein. (1033 aa)

Predicted Functional Partners:

A0A4Q9LIX6

0.985

A0A4Q9L5Y2

0.977

A0A4Q9LJH4

0.970

A0A4Q9L4G6

0.886

A0A4Q9LI24

0.886

A0A4Q9LIR1

0.886

A0A4Q9LJ84

0.886

A0A4Q9LNJ5

0.886

A0A4Q9LQ91

0.886

A0A4Q9L611

0.812

Your Current Organism:

Hamiltosporidium magnivora

NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Q9L4G6	A0A4Q9L611	ADP-ribosylation factor.	Putative subunit beta of AP-4 vesicle coat complex.	0.778
A0A4Q9L4G6	A0A4Q9LH07	ADP-ribosylation factor.	CNH domain-containing protein.	0.886
A0A4Q9L5Y2	A0A4Q9L611	Small Ras GTP-binding protein.	Putative subunit beta of AP-4 vesicle coat complex.	0.778
A0A4Q9L5Y2	A0A4Q9LH07	Small Ras GTP-binding protein.	CNH domain-containing protein.	0.977
A0A4Q9L5Y2	A0A4Q9LIR1	Small Ras GTP-binding protein.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.872
A0A4Q9L5Y2	A0A4Q9LJH4	Small Ras GTP-binding protein.	Small Rho-like GTP-binding protein.	0.953
A0A4Q9L5Y2	A0A4Q9LNJ5	Small Ras GTP-binding protein.	ADP-ribosylation factor.	0.405
A0A4Q9L611	A0A4Q9L4G6	Putative subunit beta of AP-4 vesicle coat complex.	ADP-ribosylation factor.	0.778
A0A4Q9L611	A0A4Q9L5Y2	Putative subunit beta of AP-4 vesicle coat complex.	Small Ras GTP-binding protein.	0.778
A0A4Q9L611	A0A4Q9LH07	Putative subunit beta of AP-4 vesicle coat complex.	CNH domain-containing protein.	0.812
A0A4Q9L611	A0A4Q9LI24	Putative subunit beta of AP-4 vesicle coat complex.	RAS-related GTP-binding protein Rab11.	0.820
A0A4Q9L611	A0A4Q9LIR1	Putative subunit beta of AP-4 vesicle coat complex.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.782
A0A4Q9L611	A0A4Q9LIX6	Putative subunit beta of AP-4 vesicle coat complex.	Small Rho-like GTP-binding protein.	0.778
A0A4Q9L611	A0A4Q9LJ84	Putative subunit beta of AP-4 vesicle coat complex.	ADP-ribosylation factor-like protein.	0.778
A0A4Q9L611	A0A4Q9LJH4	Putative subunit beta of AP-4 vesicle coat complex.	Small Rho-like GTP-binding protein.	0.778
A0A4Q9L611	A0A4Q9LNJ5	Putative subunit beta of AP-4 vesicle coat complex.	ADP-ribosylation factor.	0.968
A0A4Q9L611	A0A4Q9LQ91	Putative subunit beta of AP-4 vesicle coat complex.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.778
A0A4Q9LH07	A0A4Q9L4G6	CNH domain-containing protein.	ADP-ribosylation factor.	0.886
A0A4Q9LH07	A0A4Q9L5Y2	CNH domain-containing protein.	Small Ras GTP-binding protein.	0.977
A0A4Q9LH07	A0A4Q9L611	CNH domain-containing protein.	Putative subunit beta of AP-4 vesicle coat complex.	0.812