STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q9LLR9RNA recognition motif domain-containing protein. (415 aa)    
Predicted Functional Partners:
A0A4V2JWD3
Fibrillarin-like nucleolar protein.
   
 
 0.977
A0A4Q9LIV0
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase.
   
 
 0.968
A0A4Q9L2R5
Uncharacterized protein.
   
 
 0.933
A0A4Q9LDZ0
Fibrillarin-like nucleolar protein.
   
 
 0.884
A0A4Q9LHQ2
tRNA/rRNA pseudouridine synthase.
   
 
 0.878
A0A4Q9L1J0
Subunit Rpb1 of DNA-directed RNA polymerase.
   
    0.865
A0A4Q9LEN1
Helicase.
   
 
 0.854
A0A4Q9LK61
tRNA/rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.844
A0A4Q9L4U3
Nucleolar GTP-binding protein 1.
   
   0.824
A0A4Q9L2M6
Ribosomal protein L10.
   
 
 0.808
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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