STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q9LNJ4Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
A0A4Q9L010
t-SNARE coiled-coil homology domain-containing protein.
   
 0.999
A0A4Q9L081
Transport protein Sec1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.999
A0A4Q9LI84
Putative synaptobrevin.
    
 0.999
A0A4Q9L5A7
Putative synaptobrevin.
   
 0.995
A0A4Q9LJI7
Uncharacterized protein.
    
 0.988
A0A4Q9L344
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.969
A0A4Q9KZN5
Cdc48-like ATPase; Belongs to the AAA ATPase family.
    
 0.945
A0A4Q9KY41
Small Rab GTP-binding protein.
    
 0.841
A0A4Q9L110
Syntaxin.
    
 0.816
A0A4Q9LLJ1
Sec23 domain-containing protein.
   
 
 0.802
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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