STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V2JVH9XRN-like 5'-3' exoribonuclease. (663 aa)    
Predicted Functional Partners:
A0A4Q9KZF2
CID domain-containing protein.
    
 
 0.946
A0A4Q9L9E5
DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
   
 0.750
A0A4Q9LCN3
RNA 3'-terminal phosphate cyclase.
   
 
 0.714
A0A4V2JW10
Ribosome biogenesis protein Bms1.
   
 
 0.712
A0A4Q9LCG0
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.694
A0A4Q9L507
Putative S4-like small nucleolar ribonucleoprotein.
   
 0.682
A0A4Q9LDZ0
Fibrillarin-like nucleolar protein.
   
 
 0.674
A0A4Q9LM85
ATP-dependent helicase Upf1.
   
 
 0.672
A0A4Q9LHC2
S1 motif domain-containing protein.
   
 0.655
A0A4Q9LJR2
S1 motif domain-containing protein.
   
 0.655
Your Current Organism:
Hamiltosporidium magnivora
NCBI taxonomy Id: 148818
Other names: Flabelliforma magnivora, H. magnivora, Neoflabelliforma magnivora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.