STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB11701.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)    
Predicted Functional Partners:
OSB11692.1
Pseudaminic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.848
OSB11697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.826
OSB11694.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.788
OSB11696.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.707
OSB11700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.693
OSB10668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.650
OSB11695.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.538
OSB12014.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.526
OSB10661.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.497
OSB10662.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.497
Your Current Organism:
Paraclostridium bifermentans
NCBI taxonomy Id: 1490
Other names: ATCC 638, BCRC 14542, Bacillus bifermentans, Bacillus bifermentans sporogenes, Bacillus centrosporogenes, CCRC 14542, CCRC:14542, CCUG 36626, CIP 104309, Clostridium bifermentans, DSM 14991, Martellillus bifermentans, NCIMB 10716, NCTC 13019, P. bifermentans
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