STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
buk-2Butyrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (367 aa)    
Predicted Functional Partners:
OSB07839.1
Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OSB09405.1
Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
OSB11802.1
Branched-chain amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.858
buk
Butyrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.
  
  
 
0.831
OSB11803.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.816
OSB07841.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
OSB10906.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.658
B2H97_13760
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.658
OSB07842.1
2-oxoacid:acceptor oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.642
OSB10227.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.623
Your Current Organism:
Paraclostridium bifermentans
NCBI taxonomy Id: 1490
Other names: ATCC 638, BCRC 14542, Bacillus bifermentans, Bacillus bifermentans sporogenes, Bacillus centrosporogenes, CCRC 14542, CCRC:14542, CCUG 36626, CIP 104309, Clostridium bifermentans, DSM 14991, Martellillus bifermentans, NCIMB 10716, NCTC 13019, P. bifermentans
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