STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194WX54GST N-terminal domain-containing protein. (150 aa)    
Predicted Functional Partners:
A0A194XJY6
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.608
A0A194XSJ6
Uncharacterized protein.
   
 
 0.493
A0A194X0A1
RNA polymerase II subunit 3.
   
 
 0.451
A0A194XRC8
Putative DNA-directed RNA polymerase I and III subunit Rpc40.
   
 
 0.451
A0A132B2Y3
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.432
A0A194XQ09
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.412
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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