STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XAL6PLP-dependent transferase. (757 aa)    
Predicted Functional Partners:
A0A194XIP0
3-ketodihydrosphingosine reductase-like protein tsc10.
     
 0.974
A0A194XLU0
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.921
A0A194XP88
Serine palmitoyltransferas-like protein 2.
  
  
 
0.919
A0A194X196
PLP-dependent transferase.
  
  
 
0.918
A0A194WW24
WD repeat-containing protein pop3.
     
  0.900
A0A194X188
Raptor_N domain-containing protein.
     
  0.900
A0A194WZY8
Tryptophan synthase.
    
 0.888
A0A194WWB6
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.841
A0A194X3E0
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.841
A0A194XDY3
Alanine--glyoxylate aminotransferas-like protein.
    
 0.841
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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