STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XEV9RRM domain-containing protein. (316 aa)    
Predicted Functional Partners:
A0A194WRX5
Suf-domain-containing protein.
   
 0.999
A0A132B8Y7
Uncharacterized protein.
    
 0.993
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.993
A0A194XNJ6
Cleavage and polyadenylation specifity factor.
   
 0.993
A0A194XWD0
CPSF_A domain-containing protein.
    
 0.993
A0A194WT34
DUF3453 domain-containing protein.
   
 0.992
A0A194X4H2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.992
A0A194XW48
Uncharacterized protein.
   
 0.986
A0A194X7X0
Fip1-domain-containing protein.
    
 0.982
A0A132B405
WD40 repeat-like protein.
    
 0.979
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.