STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XI81Peroxin-3. (526 aa)    
Predicted Functional Partners:
A0A194WWS9
Pex19-domain-containing protein.
    
 0.999
A0A132B1V8
Pex2_Pex12 domain-containing protein.
   
 0.941
A0A194XW05
SH3 domain-containing protein.
   
 0.935
A0A194XK06
Pex14_N domain-containing protein.
   
 0.880
A0A194WXJ3
Putative peroxisomal membrane protein PMP27.
   
 0.877
A0A132BBQ7
Peroxisomal membrane protein PEX16.
    
 0.873
A0A194X9H4
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.864
A0A194X3H1
Uncharacterized protein.
    
 
 0.814
A0A194XNV4
Peroxin PEX11-1.
   
 0.806
A0A132BAK1
Uncharacterized protein.
   
 0.737
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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