STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XJE8CBF-domain-containing protein. (1073 aa)    
Predicted Functional Partners:
A0A194XVF5
Noc2-domain-containing protein.
  
 
 0.997
A0A194XQ73
Nucleic acid-binding protein.
   
 
 0.990
A0A194XHM8
RNA-binding domain-containing protein.
   
 
 0.972
A0A132BAP8
Cytosine-5--methyltransferase NCL1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.970
A0A132B597
ATP-dependent RNA helicase-like protein dbp9.
   
 
 0.969
A0A132B1J6
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.965
A0A194XDD3
RNA helicase.
   
 
 0.965
A0A194WU30
RRM domain-containing protein.
   
 
 0.959
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.959
A0A194WU01
Brix-domain-containing protein.
   
 
 0.952
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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