STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XSC8Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (192 aa)    
Predicted Functional Partners:
A0A194WTX2
TAFII55_N domain-containing protein.
    
 0.999
A0A194WVQ5
Putative transcription initiation factor TFIID subunit 13.
   
 0.999
A0A194X3W8
TFIID_20kDa domain-containing protein.
    
 0.999
A0A194XBS1
DUF1546-domain-containing protein.
    
 0.999
A0A194XJZ0
Putative TATA-box-binding protein.
    
 0.999
A0A194XMP6
WD40 repeat-like protein.
    
 0.999
A0A194XW76
TFIID-31kDa-domain-containing protein.
   
 0.999
A0A194XWE5
Uncharacterized protein.
    
 0.999
A0A194XWW4
DUF3591 domain-containing protein.
    
 0.999
A0A132B2W6
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.998
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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