STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XVE2P-loop containing nucleoside triphosphate hydrolase protein. (998 aa)    
Predicted Functional Partners:
A0A194X785
Uncharacterized protein.
  
 0.999
A0A194XCZ8
WD40 repeat-like protein.
   
 0.999
A0A194XP60
PROCN-domain-containing protein.
   
 0.999
A0A194XV76
Sec63-domain-containing protein.
   
 0.999
A0A132BDM2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.998
A0A194XQN3
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.
   
 0.998
A0A194XP40
Small nuclear ribonucleoprotein Sm D3.
   
 0.997
A0A194XQL6
Small nuclear ribonucleoprotein Sm D2.
   
 0.997
A0A194XWI9
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.997
A0A132B3A4
Protein prenylyltransferase.
   
 
 0.996
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.