STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194XWA7RING-type domain-containing protein. (488 aa)    
Predicted Functional Partners:
A0A194X165
Cysteine proteinase.
    
 0.670
A0A194XPV5
Polyubiquitin.
    
  0.556
A0A194X041
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 
 0.532
A0A194XDK2
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
      
 0.489
A0A132B1X9
Putative histidine-rich membrane protein KE4 like protein.
      
 0.487
A0A132B7V5
Nuclear undecaprenyl pyrophosphate synthase-like protein.
    
 
 0.465
A0A132BD57
RNA polymerase I-specific transcription initiation factor-like protein rrn7.
    
  0.450
A0A194X4J7
Putative ubiquitin-40S ribosomal protein S27a.
    
  0.450
A0A194XE28
Putative polyubiquitin.
    
  0.450
A0A194XKG1
BZIP domain-containing protein.
    
  0.450
Your Current Organism:
Phialocephala scopiformis
NCBI taxonomy Id: 149040
Other names: CBS 468.94, P. scopiformis
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