STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EB75_03825Trypsin; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
EB75_00785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.717
EB75_10305
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.673
EB75_09140
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
EB75_03830
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.582
EB75_24350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.574
EB75_01470
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
EB75_12270
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
EB75_15800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
EB75_07115
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.508
EB75_19095
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
Your Current Organism:
Mycobacterium sp. STF2
NCBI taxonomy Id: 1490484
Other names: M. sp. ST-F2, Mycobacterium sp. ST-F2
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