STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EB75_08045TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
EB75_08040
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
EB75_08050
Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the long-chain O-acyltransferase family.
       0.773
EB75_02765
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
EB75_08055
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
EB75_08035
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.624
EB75_25400
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
EB75_25710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.469
EB75_03190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.462
EB75_25705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.462
EB75_01730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
Your Current Organism:
Mycobacterium sp. STF2
NCBI taxonomy Id: 1490484
Other names: M. sp. ST-F2, Mycobacterium sp. ST-F2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.