STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EB75_21035Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)    
Predicted Functional Partners:
EB75_21030
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.999
EB75_14560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.808
purD
Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.
      
 0.779
egtD
histidyl-tRNA synthetase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
  
   
 0.743
EB75_21015
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.722
EB75_07215
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
EB75_07155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
pyrF
Orotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.674
EB75_24885
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.645
EB75_23915
Citrate (pro-3S)-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
      
 0.636
Your Current Organism:
Mycobacterium sp. STF2
NCBI taxonomy Id: 1490484
Other names: M. sp. ST-F2, Mycobacterium sp. ST-F2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.