Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQ1_00121Hypothetical protein. (331 aa)    
Predicted Functional Partners:
AQ1_00118
Nitrous oxide reductase family maturation protein NosD.
 
     0.863
xanB
Xanthan biosynthesis protein XanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.861
AQ1_00120
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.857
ypjH
Putative glycosyltransferase YpjH.
 
     0.800
AQ1_00102
Putative O-glycosylation ligase, exosortase A-associated.
 
 
 0.787
AQ1_00094
femAB-related protein, PEP-CTERM system-associated.
 
     0.749
wecA
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
 
 
 0.729
nodB
Chitooligosaccharide deacetylase.
 
     0.726
AQ1_00115
Putative protein; Cellulose biosynthesis.
 
     0.724
wza
Putative polysaccharide export protein wza.
 
 
  0.716
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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