Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhtD-hydantoinase/dihydropyrimidinase. (479 aa)    
Predicted Functional Partners:
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
 
 0.994
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 0.979
UPB1
Beta-ureidopropionase.
 
  0.976
pucI
Putative allantoin permease.
 
  
 0.969
sudA
Sulfide dehydrogenase subunit alpha.
 
 
 0.927
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.899
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.868
nagAa
ferredoxin--NAD(P)(+) reductase; Naphthalene dioxygenase/salicylate 5-hydroxylase ferredoxin-specific.
  
 
 0.867
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.850
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
  
 0.850
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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