Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQ1_01022Hypothetical protein. (208 aa)    
Predicted Functional Partners:
ctrA
Cell cycle response regulator CtrA.
  
 
 0.921
luxQ-2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.912
AQ1_02225
Blue-light-activated protein.
  
 0.911
pleC-3
Non-motile and phage-resistance protein.
  
 0.895
AQ1_00718
Blue-light-activated protein.
   
 0.883
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.875
ctrA-2
Cell cycle transcriptional regulator CtrA.
    
 0.869
cheY
Chemotaxis protein CheY.
 
 
 0.860
qseB
Transcriptional regulatory protein QseB.
  
 
 0.815
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
    
 0.787
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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