Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AQ1_01047Beta-galactosidase. (655 aa)    
Predicted Functional Partners:
rafA
Alpha-galactosidase.
 
  
 0.964
araB
L-arabinolactonase.
 
  
  0.851
yicI
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.828
AQ1_01048
Putative dienelactone hydrolase.
 
     0.810
yidK
Putative symporter YidK; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.804
AQ1_00043
Putative ankyrin repeat protein.
    
 0.803
AQ1_00272
Hypothetical protein.
    
  0.788
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.749
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.744
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
    
   0.708
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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