Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pldPhospholipase D. (612 aa)    
Predicted Functional Partners:
ALPL
Alkaline phosphatase, tissue-nonspecific isozyme; Belongs to the alkaline phosphatase family.
  
 
 0.806
glpQ
Glycerophosphoryl diester phosphodiesterase.
 
 
 0.705
AQ1_01316
3-phytase; Myo-inositol-hexaphosphate 3-phosphohydrolase.
 
  
 0.532
folB
Dihydroneopterin aldolase.
     
 0.521
uvrA
uvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.504
gst3
Glutathione S-transferase 3; Belongs to the GST superfamily.
  
     0.487
folE
GTP cyclohydrolase 1.
    
 0.456
folE-2
GTP cyclohydrolase 1.
    
 0.456
erg3
C-5 sterol desaturase.
       0.447
AQ1_01211
Hypothetical protein.
       0.447
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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