Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctBC4-dicarboxylate transport sensor protein DctB. (688 aa)    
Predicted Functional Partners:
luxQ-2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.969
luxQ-3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.932
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.910
Ogt
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.
 
 
 0.907
atoC
Acetoacetate metabolism regulatory protein AtoC.
 
 
  0.906
AQ1_00114
Acyl carrier protein.
  
  0.812
AQ1_00095
Exosortase A.
 
     0.801
AQ1_00090
Tyrosine kinase.
 
     0.800
AQ1_00102
Putative O-glycosylation ligase, exosortase A-associated.
 
     0.797
wza
Putative polysaccharide export protein wza.
 
     0.796
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.