Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQ1_01331Putative GTPase. (337 aa)    
Predicted Functional Partners:
mutB
methylmalonyl-CoA mutase large subunit.
 0.999
mutA
methylmalonyl-CoA mutase small subunit.
 
 0.998
meaA
Protein MeaA.
 0.998
mcee
methylmalonyl-CoA epimerase, mitochondrial.
 
  
 0.721
AQ1_01330
Preprotein translocase subunit SecG.
       0.697
ctb
Group 3 truncated hemoglobin ctb.
       0.485
PCCB
propionyl-CoA carboxylase beta chain, mitochondrial.
 
     0.431
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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