Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQ1_01358Putative small protein containing a coiled-coil domain protein. (65 aa)    
Predicted Functional Partners:
TP53I3
Quinone oxidoreductase PIG3.
       0.539
AQ1_01359
Hypothetical protein.
       0.504
macB-2
Macrolide export ATP-binding/permease protein MacB.
       0.442
yvrN
Putative ABC transporter permease YvrN.
       0.442
AQ1_01355
Putative ABC transporter ATP-binding protein.
       0.442
mdtA-3
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.442
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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