Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drrADaunorubicin/doxorubicin resistance ATP-binding protein DrrA. (364 aa)    
Predicted Functional Partners:
ycf38
Putative transport permease ycf38.
 
 
 0.992
yadH
Inner membrane transport permease YadH.
 
 
 0.928
AQ1_01989
Gliding motility-associated ABC transporter permease protein GldF.
  
 0.872
opuCB
Glycine betaine/carnitine/choline transport system permease protein OpuCB.
     
  0.852
Abcb10
ATP-binding cassette sub-family B member 10, mitochondrial.
   
 0.851
AQ1_01515
Putative isomerase.
       0.773
yffB
Protein YffB; Belongs to the ArsC family.
       0.773
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily.
  
  
 
0.772
AQ1_00593
Putative peptide ABC transporter periplasmic-binding protein y4tO.
    
  0.741
atpC
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.738
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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