Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mcpA-2Chemoreceptor McpA. (568 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
  
 0.948
cheR2
Chemotaxis protein methyltransferase Cher2.
 
  
 0.921
cheB
Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.919
cheW
Putative chemotaxis protein CheW.
 
  
 0.916
luxQ-2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
  
 0.886
luxQ-3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
  
 0.802
AQ1_00718
Blue-light-activated protein.
 
  
 0.797
AQ1_02225
Blue-light-activated protein.
 
  
 0.791
pleC-3
Non-motile and phage-resistance protein.
 
  
 0.786
cheY-2
Chemotaxis protein CheY.
  
  
  0.785
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
Server load: medium (46%) [HD]