Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
phbC-2Poly-beta-hydroxybutyrate polymerase. (386 aa)    
Predicted Functional Partners:
AQ1_01565
Putative protein.
 
   
 0.895
fadJ
Fatty acid oxidation complex subunit alpha.
     
 0.776
AQ1_01868
Polyhydroxyalkanoate depolymerase, intracellular.
 
  
 0.745
phbB
acetoacetyl-CoA reductase.
 
  
 0.710
AQ1_02428
Phasin family protein.
 
  
 0.643
phaA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.612
RPP14
Hydroxyacyl-thioester dehydratase type 2, mitochondrial.
    
 0.539
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
 0.535
maeB
NADP-dependent malic enzyme.
  
 
 0.480
tme
NADP-dependent malic enzyme.
  
 
 0.480
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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