Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
mkl-2Putative ribonucleotide transport ATP-binding protein mkl. (270 aa)    
Predicted Functional Partners:
AQ1_01570
Putative ABC transporter permease protein.
 
 0.998
bll6063
Putative protein.
 0.994
AQ1_00664
Putative ABC transporter permease protein.
 
 0.985
AQ1_01567
ABC-type uncharacterized transport system, auxiliary component.
 
 
  0.965
AQ1_00827
Putative ABC transporter-binding protein.
  
 0.957
mlaC
Putative phospholipid-binding protein MlaC.
  
 
 0.665
nuoA
NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.648
AQ1_00587
Putative ABC transporter ATP-binding protein.
    
  0.608
AQ1_00865
Lipopolysaccharide ABC transporter permease LptF.
  
  
 0.599
lptG
Lipopolysaccharide export system permease protein LptG.
  
  
 0.585
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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