Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQ1_01591Hypothetical protein. (199 aa)    
Predicted Functional Partners:
Trnt1
CCA tRNA nucleotidyltransferase 1, mitochondrial; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.806
nudL
Putative Nudix hydrolase NudL.
       0.806
AQ1_01587
Polyketide cyclase / dehydrase and lipid transport.
       0.773
AQ1_01589
Hypothetical protein.
       0.773
AQ1_01594
Hypothetical protein; N-terminal double-transmembrane domain.
 
     0.758
AQ1_01595
Putative membrane protein.
 
     0.737
AQ1_01593
Putative conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.707
yeaC
Putative protein.
 
     0.660
PRXIIE-1
peroxiredoxin-2E-1, chloroplastic; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
       0.503
AQ1_01170
UPF0262 protein Sala_0765; Belongs to the UPF0262 family.
  
     0.498
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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