Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
iscSCysteine desulfurase. (405 aa)    
Predicted Functional Partners:
fdxB-2
2Fe-2S ferredoxin.
 0.992
AQ1_00031
SUF system FeS assembly protein, NifU family.
  
 0.988
AQ1_00370
Putative protein; Belongs to the HesB/IscA family.
 
 
 0.954
NIFU5
NifU-like protein 5, mitochondrial.
 
 0.948
fdxB
2Fe-2S ferredoxin.
 
 0.935
AQ1_02157
Hypothetical protein; Sulfurtransferase TusA homolog; Belongs to the sulfur carrier protein TusA family.
   
 0.933
erpA
Putative iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family.
 
 
 0.925
AQ1_02765
P-aminobenzoate N-oxygenase AurF.
   
 0.903
nagAa
ferredoxin--NAD(P)(+) reductase; Naphthalene dioxygenase/salicylate 5-hydroxylase ferredoxin-specific.
  
 0.900
AQ1_00114
Acyl carrier protein.
    
  0.858
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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