Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sglTSodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (519 aa)    
Predicted Functional Partners:
AQ1_01698
sapC.
 
     0.720
AQ1_01697
Hypothetical protein.
 
     0.718
rebH-2
Flavin-dependent tryptophan halogenase RebH.
 
     0.661
AQ1_01700
Catecholate siderophore receptor CirA.
 
     0.617
mdlC
Benzoylformate decarboxylase; Belongs to the TPP enzyme family.
       0.478
AQ1_00851
Retaining alpha-galactosidase.
  
     0.411
AQ1_01045
Putative iron-regulated outer membrane virulence protein.
 
     0.404
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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