Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
htr4Halobacterial transducer protein 6. (530 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
 0.993
cheW
Putative chemotaxis protein CheW.
 
 0.983
luxQ-2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.961
cheR2
Chemotaxis protein methyltransferase Cher2.
 
 0.928
cheB
Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.888
ycdT
Putative diguanylate cyclase YcdT.
 
 
 0.881
luxQ-3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 0.862
opuCB
Glycine betaine/carnitine/choline transport system permease protein OpuCB.
     
  0.852
AQ1_00718
Blue-light-activated protein.
 
 0.844
AQ1_02225
Blue-light-activated protein.
 
 0.842
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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