Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cyaBCyclolysin secretion/processing ATP-binding protein CyaB. (561 aa)    
Predicted Functional Partners:
prtE
Proteases secretion protein PrtE.
 0.995
pstB
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.878
lktB
Leukotoxin translocation ATP-binding protein LktB.
 
    
0.823
Abcb10
ATP-binding cassette sub-family B member 10, mitochondrial.
   
  0.816
frpC
Iron-regulated protein FrpC.
 
  
 0.810
bepC
Outer membrane efflux protein BepC.
  
 
 0.807
lktA
Leukotoxin.
 
  
 0.801
macA-2
Macrolide-specific efflux protein MacA precursor.
  
 0.766
mdtA-3
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.742
macA-3
Putative macrolide-specific efflux protein MacA.
  
 0.742
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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