Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccrcrotonyl-CoA reductase. (439 aa)    
Predicted Functional Partners:
yngJ-2
Putative acyl-CoA dehydrogenase YngJ.
 
  0.951
fadD13
long-chain-fatty-acid--CoA ligase FadD13.
   
  0.771
lcfB
long-chain-fatty-acid--CoA ligase.
   
  0.771
fadD29
long-chain-fatty-acid--AMP ligase FadD29.
   
  0.771
lcfA
long-chain-fatty-acid--CoA ligase.
   
  0.771
alkK
medium-chain-fatty-acid--CoA ligase.
   
  0.771
fadD
long-chain-fatty-acid--CoA ligase.
   
  0.771
pcl
4-coumarate--CoA ligase; Fragment.
   
  0.770
meaA
Protein MeaA.
 
   
 0.765
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
 0.761
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.