Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQ1_01948Cellulose synthase subunit BcsC. (205 aa)    
Predicted Functional Partners:
AQ1_02151
Putative PEP-CTERM system TPR-repeat lipoprotein.
 
  0.775
AQ1_02835
Type III secretion low calcium response chaperone LcrH/SycD.
 
  0.768
AQ1_01324
Patatin-related protein.
  
 
   0.717
AQ1_00969
Hypothetical protein.
  
     0.700
AQ1_00694
Chromosome segregation protein SMC.
 
     0.698
AQ1_01840
Hypothetical protein.
  
     0.689
AQ1_02263
Putative protein; Belongs to the bacterial secretin family.
  
 0.687
AQ1_02817
Hypothetical protein.
 
  0.675
AQ1_02377
Putative O-linked N-acetylglucosamine transferase, SPINDLY family.
  
 0.667
AQ1_02009
Hypothetical protein.
  
     0.655
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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