Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQ1_01969Transferase 2, rSAM/selenodomain-associated. (206 aa)    
Predicted Functional Partners:
AQ1_01968
Transferase 1, rSAM/selenodomain-associated.
 
     0.952
AQ1_00333
TVP38/TMEM64 family membrane protein.
 
     0.751
phhA
Phenylalanine-4-hydroxylase.
       0.668
AQ1_01971
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; Catechol pathway.
       0.668
AQ1_02293
TVP38/TMEM64 family membrane protein.
 
   
 0.656
thrS
threonine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.634
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
     
 0.591
merA
Mercuric reductase.
 
     0.560
AGMO
Alkylglycerol monooxygenase.
 
 
   0.537
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.517
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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