Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
blr3397Nitrilase. (344 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large chain.
    
 0.788
UPB1
Beta-ureidopropionase.
  
  
 0.750
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
  0.715
iorA
Indolepyruvate oxidoreductase subunit IorA.
    
 0.712
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.707
ansA
L-asparaginase.
  
  
 0.686
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.681
maeB
NADP-dependent malic enzyme.
    
  0.675
tme
NADP-dependent malic enzyme.
    
  0.675
glnA
Glutamine synthetase 1.
    
 0.672
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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