Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
minDSeptum site-determining protein MinD. (409 aa)    
Predicted Functional Partners:
AQ1_02262
Flp pilus assembly protein CpaB.
 
 
 0.997
AQ1_02267
Flp pilus assembly protein TadB.
 
 
 0.997
AQ1_02263
Putative protein; Belongs to the bacterial secretin family.
 
 
 0.996
AQ1_02268
Flp pilus assembly protein TadB.
 
 
 0.995
AQ1_02266
Putative conjugal transfer proteinc/MT3759.
 
 
 0.994
AQ1_02261
Flp pilus assembly protein, protease CpaA.
 
  
 0.976
AQ1_02252
Flp pilus assembly protein, pilin Flp.
 
  
 0.954
AQ1_00704
Flp pilus assembly protein TadG.
 
    0.951
AQ1_00705
Flp pilus assembly protein TadG.
 
    0.927
AQ1_00703
Flp pilus assembly protein TadG.
 
    0.921
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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