Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQ1_02610Hypothetical protein. (512 aa)    
Predicted Functional Partners:
AQ1_02611
50S ribosomal protein L22/unknown domain fusion protein.
 
     0.972
adkA
Adenylate kinase.
 
     0.947
gpsA
Glycerol-3-phosphate dehydrogenase; NAD(P)+; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
   0.696
AQ1_01133
Hypothetical protein.
    
  0.678
AQ1_01339
Hypothetical protein.
    
  0.678
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
  0.678
glmS
Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 0.564
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.526
btrR
L-glutamine:2-deoxy-scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.503
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
     
 0.439
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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