Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AQ1_02631Dipeptidyl-peptidase 6. (293 aa)    
Predicted Functional Partners:
AQ1_02377
Putative O-linked N-acetylglucosamine transferase, SPINDLY family.
   
 
 0.801
AQ1_02632
DNA-binding transcriptional repressor MarR.
       0.797
ftsX
Cell division protein FtsX.
   
 
 0.781
ctpA
Carboxy-terminal-processing protease; Belongs to the peptidase S41A family.
    
 
 0.759
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.726
AQ1_01133
Hypothetical protein.
  
  
 0.663
AQ1_01137
Prophage tail length tape measure protein.
  
   0.660
pepA-2
Putative cytosol aminopeptidase; Belongs to the peptidase M17 family.
       0.643
AQ1_02601
Hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
    
 
 0.630
fliL
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.614
Your Current Organism:
alpha proteobacterium Q1
NCBI taxonomy Id: 1492281
Other names: a. proteobacterium Q-1, alpha proteobacterium Q-1
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